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ELIXIR Norway

Life science data infrastructure and bioinformatics services for researchers across Norwegian universities.

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Overview

ELIXIR Norway is the Norwegian node of ELIXIR Europe, the European intergovernmental organisation that helps researchers work with life science data spanning genomics, proteomics, and related fields. Coordinated from the University of Bergen, ELIXIR Norway connects four additional partner institutions — the University of Oslo, UiT The Arctic University of Norway, the Norwegian University of Science and Technology (NTNU), and the Norwegian University of Life Sciences (NMBU) — into a national network that links Norwegian research expertise to ELIXIR's broader infrastructure across 25 member countries. The node is staffed by more than 70 researchers, engineers, and scientists distributed across these five universities.

ELIXIR operates through a Hub and Nodes model. The ELIXIR Hub provides central coordination from the Wellcome Genome Campus near Cambridge, UK, while each member country runs its own Node. ELIXIR Norway serves as Norway's Node, providing bioinformatics services, data management tools, training, and secure e-infrastructure for life science researchers nationally and internationally.

Organisational Structure

  • ELIXIR Norway is headed by Sushma Grellscheid (Professor, University of Bergen) as Head of Node, with Eivind Hovig (Professor Emeritus, University of Oslo) serving as Co-head.
  • Node Leaders at each partner institution include Rein Aasland (University of Oslo), Erik Hjerde (UiT The Arctic University of Norway), Pål Sætrom (NTNU), and Simen Rød Sandve (NMBU).
  • Coordination roles cover technical coordination (Kjell Petersen, University of Bergen), data management (Korbinian Bösl, University of Bergen), node coordination (Ingeborg Winge, University of Bergen), and service and training coordination (Espen Åberg, UiT).
  • A Steering Board chaired by Inge Jonassen (Head of the Department of Informatics, University of Bergen) provides governance, with members drawn from each partner university.
  • A Scientific Advisory Committee includes international experts from the Spanish National Cancer Research Centre, the University of Marseille (ELIXIR France), Vrije Universiteit Amsterdam (ELIXIR Netherlands), and the European Molecular Biology Laboratory.
  • A Stakeholder Panel includes representatives from NTNU, Oslo University Hospital, the Institute of Marine Research, and the Norwegian Directorate of Health (Helsedirektoratet).

Key Activities and Services

  • Provision of bioinformatics services and secure e-infrastructure for life science researchers across Norway.
  • Data management support and tools, including work on FAIR (Findable, Accessible, Interoperable, Reusable) metadata standards — for example, contributing to improved discoverability and reuse of non-human pathogen data.
  • Training programmes coordinated nationally across the five partner institutions.
  • Development and evaluation of Trusted Research Environments (TREs), including co-leadership of the TRE Evaluation Workshop bringing together 30 stakeholders to advance a TRE Blueprint for secure data access across Europe.
  • Participation in the Genomic Data Infrastructure (GDI) initiative, including a three-day hackathon in Finnish Lapland involving 59 developers from 19 EU countries, focused on federated and secure cross-border genomic data sharing.

International Collaboration and Affiliations

  • ELIXIR Norway is an active node within ELIXIR Europe, collaborating with nodes across 25 member countries and contributing to shared infrastructure, tools, and standards.
  • The node coordinates with Norwegian representatives to the Global Biodata Coalition, a forum that brings together research funders and data resource managers to develop shared strategies and funding models for sustaining global biodata infrastructure.
  • Impact from ELIXIR-funded work is categorised across distinct areas, with each activity mapped to one or more impact categories, following a framework adapted from Martin et al. (2021).

ELIXIR Norway's activities span research infrastructure, data stewardship, training, and international collaboration, with its five-institution network positioned as Norway's primary contribution to European and global life science data infrastructure.

Software

CarveMe logo
CarveMe
Automated genome-scale metabolic model generation from bacterial genomes for biotechnology and microbiology.
CHOPCHOP logo
CHOPCHOP
Identify optimal CRISPR-Cas sgRNA targets for Cas9, Cpf1, and TALEN systems with ranked efficiency and specificity predictions.
Covid-19 Data Portal Norway logo
Covid-19 Data Portal Norway
Centralised data sharing and access for Norwegian COVID-19 research, with integrated tools, databases, and collaboration resources.
Data Stewardship Wizard (DSW) logo
Data Stewardship Wizard (DSW)
Guided Data Management Plan creation aligned with FAIR principles for life science research.
EDAM logo
EDAM
Structured vocabulary ontology for bioinformatics data types, formats, operations, and topics.
FAIRtracks logo
FAIRtracks
Metadata harmonization, validation, and discovery for genomic track datasets following FAIR principles.
FEGA-Norway logo
FEGA-Norway
Secure repository for genetic and phenotypic data with federated cross-border sharing and fine-grained access control.
Galaxy logo
Galaxy
No-code bioinformatics analysis with nearly 2000 tools and pre-built workflows for genomics, transcriptomics, proteomics, and metabolomics.
GSuite HyperBrowser logo
GSuite HyperBrowser
Statistical analysis of large-scale genomic and epigenomic track collections with hypothesis testing and Galaxy integration.
HUNT Cloud logo
HUNT Cloud
Secure storage, sharing, and analysis of potentially identifiable human data with regulatory compliance.
immuneML logo
immuneML
Machine learning framework for analyzing adaptive immune receptors and repertoires to predict immune responses and diseases.
JASPAR logo
JASPAR
Curated transcription factor binding profiles for eukaryotes, with open access and programmatic APIs.
LiceBase logo
LiceBase
Genomic database for Atlantic salmon louse with gene search, transcriptomic data, morphological images, and RNAi experiment records.
Marine Metagenomics Portal (MMP) logo
Marine Metagenomics Portal (MMP)
Curated marine microbial genomics and metagenomics databases with unified search and analysis workflows.
MirGeneDB logo
MirGeneDB
Curated microRNA gene database with validated annotations for 75 metazoan species and expression data.
NeLS logo
NeLS
Analysis, sharing, and secure storage for high-throughput genomics and life science data.
RDMkit logo
RDMkit
Structured guidance for research data management across the entire lifecycle, with domain-specific advice for life sciences.
SAFE logo
SAFE
Secure processing, sharing, and analysis of sensitive personal data in research with distributed team access.
SalmoBase logo
SalmoBase
Genomic data resource with genome browsers, BLAST search, and gene assemblies for Atlantic salmon and salmonid species.
SARS-CoV2 DB logo
SARS-CoV2 DB
Curated SARS-CoV-2 genomic database with standardized metadata and linked bioinformatics tools for comparative analysis.
TSD logo
TSD
Secure data collection, storage, and analysis for sensitive research data with Norwegian and EU compliance.
UniBind logo
UniBind
Transcription factor-DNA interaction database across nine species, with quality-tiered binding site predictions from uniformly processed ChIP-seq data.
WEBnma logo
WEBnma
Normal Mode Analysis for predicting protein structure flexibility and large-scale conformational motions.