Seqera

Seqera is the bioinformatics platform built by the creators of Nextflow, designed to bring data, pipelines, and teams together across the full spectrum of life sciences research. Serving the world's leading scientific organizations, Seqera centralizes data management, orchestrates computational workflows, and ensures every analysis is governed, auditable, and reproducible — enabling teams to get to insights faster and trust the results when they arrive.

The platform powers agentic bioinformatics at scale, supporting everything from large-scale genomics to advanced AI-based drug discovery. Seqera connects bioinformaticians, lab scientists, and external partners in a unified environment where scientists and agentic workflows operate side by side, delivering measurable outcomes including reductions in cloud costs, runtime, and time-to-results, as well as dramatic increases in sample throughput and genomic surveillance capacity.

Core Platform Capabilities

• Centralized orchestration of data and pipelines across teams and infrastructure environments
• End-to-end workflow management optimized for high-throughput, cost-effective computation
• Unified environment supporting both human scientists and agentic workflows operating in parallel
• Intuitive UI, secure APIs, and real-time collaboration tools built for modern R&D workflows
• Full run tracking, versioned analyses, and secure execution for complete reproducibility
• Built-in access controls and collaboration features to keep teams aligned and audit-ready

Infrastructure and Deployment

• Integrates with existing on-premises systems and major cloud platforms including AWS, GCP, and Azure
• No forced data migrations — data stays within your existing infrastructure
• Full control over data residency with the ability to scale globally without compromising security or performance
• Compatible with existing AI tools, providing a secure foundation without exposing data to unauthorized destinations
• Supports compliance and audit-readiness with 100% traceability across all runs

Compliance and Reproducibility

• Versioned analyses and run tracking ensure a complete audit trail for regulatory submissions
• Secure execution environments keep data within customer-controlled infrastructure
• Built-in controls for access management and team collaboration support regulatory demands
• Designed to meet the compliance requirements of life sciences organizations at every stage

Nextflow Open Source Ecosystem

• Seqera is built by the team behind Nextflow, the global standard in bioinformatics workflow management
• Nextflow enables scalable and reproducible scientific workflows using containers with a fluent syntax
• Supports deployment on any cloud or cluster environment
• Over 2.5 million monthly Nextflow runs and more than 20,000 scientists using Nextflow daily
• 140+ open source pipelines available through the community
• A global community of over 100,000 scientists leveraging Nextflow and Seqera to advance their research

Expert Support and Services

• Dedicated team of bioinformaticians and platform specialists available to customers
• Assistance with pipeline fine-tuning, troubleshooting, and integration with agents and compute infrastructure
• Domain expertise straight from the source — the same team that created and maintains Nextflow

Seqera delivers proven, quantifiable impact for scientific teams, including reductions of up to 81% in compute costs for RNA-Seq, 70% reductions in pipeline costs, 35x increases in sample throughput, and 10x genomic surveillance capacity — making it the intelligent engine powering life sciences from discovery to impact.